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SAKAI WataruBiosignal Research CenterAssistant Professor
Research activity information
■ Award- Nov. 2017 Japanese Environmental Mutagen Society, Oxford Journal Award
- Sep. 2017 Fanconi Anemia Research Fund, Travel Award, Fatty aldehyde dehydrogenase as a novel binding partner of FANCD2
- Summary Fanconi anemia (FA) is a rare genetic disease caused by the loss of function of one of the 22 associated genes and is characterized by bone marrow failure, cancer predisposition, and developmental defects. The proteins encoded by these genes (FA proteins) mainly function in DNA damage response and repair. Although FA deficiency has multiple effects on the regulation of lipid metabolism, the molecular function of FA proteins in the context of FA pathology remains unclear. In the present study, we demonstrated that FANCD2, a key component of FA proteins, interacts with lipid metabolism-related factors and that FANCD2 deficiency downregulates the cellular levels of fatty acids. Moreover, a portion of FANCD2 is localized to nuclear lipid droplets in response to oleic acid treatment. These subcellular dynamics are independent of FANCD2 monoubiquitination, which is essential for the DNA damage response. Collectively, these findings demonstrate that FANCD2 responds to not only DNA damage but also oleic acid exposure, providing insights into the pathogenesis of lipid dysregulation in FA.Cold Spring Harbor Laboratory, Feb. 2025
- Nov. 2022, The Journal of dermatology, 50(3) (3), 407 - 408, English, International magazine[Refereed]Scientific journal
- The XPC protein complex plays a central role in DNA lesion recognition for global genome nucleotide excision repair (GG-NER). Lesion recognition can be accomplished in either a UV-DDB-dependent or -independent manner; however, it is unclear how these sub-pathways are regulated in chromatin. Here, we show that histone deacetylases 1 and 2 facilitate UV-DDB-independent recruitment of XPC to DNA damage by inducing histone deacetylation. XPC localizes to hypoacetylated chromatin domains in a DNA damage-independent manner, mediated by its structurally disordered middle (M) region. The M region interacts directly with the N-terminal tail of histone H3, an interaction compromised by H3 acetylation. Although the M region is dispensable for in vitro NER, it promotes DNA damage removal by GG-NER in vivo, particularly in the absence of UV-DDB. We propose that histone deacetylation around DNA damage facilitates the recruitment of XPC through the M region, contributing to efficient lesion recognition and initiation of GG-NER.Apr. 2022, iScience, 25(4) (4), 104040 - 104040, English, International magazine[Refereed]Scientific journal
- The ubiquitin-proteasome system (UPS) plays crucial roles in regulation of various biological processes, including DNA repair. In mammalian global genome nucleotide excision repair (GG-NER), activation of the DDB2-associated ubiquitin ligase upon UV-induced DNA damage is necessary for efficient recognition of lesions. To date, however, the precise roles of UPS in GG-NER remain incompletely understood. Here, we show that the proteasome subunit PSMD14 and the UPS shuttle factor RAD23B can be recruited to sites with UV-induced photolesions even in the absence of XPC, suggesting that proteolysis occurs at DNA damage sites. Unexpectedly, sustained inhibition of proteasome activity results in aggregation of PSMD14 (presumably with other proteasome components) at the periphery of nucleoli, by which DDB2 is immobilized and sequestered from its lesion recognition functions. Although depletion of PSMD14 alleviates such DDB2 immobilization induced by proteasome inhibitors, recruitment of DDB2 to DNA damage sites is then severely compromised in the absence of PSMD14. Because all of these proteasome dysfunctions selectively impair removal of cyclobutane pyrimidine dimers, but not (6-4) photoproducts, our results indicate that the functional integrity of the proteasome is essential for the DDB2-mediated lesion recognition sub-pathway, but not for GG-NER initiated through direct lesion recognition by XPC.Lead, Nov. 2020, Scientific reports, 10(1) (1), 19704 - 19704, English, International magazine[Refereed]Scientific journal
- Nucleotide excision repair (NER) is a versatile DNA repair pathway, which can remove an extremely broad range of base lesions from the genome. In mammalian global genomic NER, the XPC protein complex initiates the repair reaction by recognizing sites of DNA damage, and this depends on detection of disrupted/destabilized base pairs within the DNA duplex. A model has been proposed that XPC first interacts with unpaired bases and then the XPD ATPase/helicase in concert with XPA verifies the presence of a relevant lesion by scanning a DNA strand in 5'-3' direction. Such multi-step strategy for damage recognition would contribute to achieve both versatility and accuracy of the NER system at substantially high levels. In addition, recognition of ultraviolet light (UV)-induced DNA photolesions is facilitated by the UV-damaged DNA-binding protein complex (UV-DDB), which not only promotes recruitment of XPC to the damage sites, but also may contribute to remodeling of chromatin structures such that the DNA lesions gain access to XPC and the following repair proteins. Even in the absence of UV-DDB, however, certain types of histone modifications and/or chromatin remodeling could occur, which eventually enable XPC to find sites with DNA lesions. Exploration of novel factors involved in regulation of the DNA damage recognition process is now ongoing.BMC, 2019, Genes and environment : the official journal of the Japanese Environmental Mutagen Society, 41, 2 - 2, English, International magazine[Refereed]Scientific journal
- Fanconi anemia (FA) is a rare genetic disease characterized by the deficiency of the cellular response and repair pathway for DNA interstrand crosslink (ICL) damage. Although recent studies have revealed the detailed molecular functions of FA proteins encoded by 22 genes, the mechanism of occurrence of endogenous ICLs in the human body remains poorly understood. In this short review, we summarize the potential endogenous sources of ICLs counteracted by FA proteins, and provide perspectives on the unanswered questions regarding FA.2019, Genes and environment : the official journal of the Japanese Environmental Mutagen Society, 41, 6 - 6, English, International magazine[Refereed]Scientific journal
- Thymine DNA glycosylase (TDG) is a base excision repair (BER) enzyme, which is implicated in correction of deamination-induced DNA mismatches, the DNA demethylation process and regulation of gene expression. Because of these pivotal roles associated, it is crucial to elucidate how the TDG functions are appropriately regulated in vivo. Here, we present evidence that the TDG protein undergoes degradation upon various types of DNA damage, including ultraviolet light (UV). The UV-induced degradation of TDG was dependent on proficiency in nucleotide excision repair and on CRL4CDT2 -mediated ubiquitination that requires a physical interaction between TDG and DNA polymerase clamp PCNA. Using the Tdg-deficient mouse embryonic fibroblasts, we found that ectopic expression of TDG compromised cellular survival after UV irradiation and repair of UV-induced DNA lesions. These negative effects on cellular UV responses were alleviated by introducing mutations in TDG that impaired its BER function. The expression of TDG induced a large-scale alteration in the gene expression profile independently of its DNA glycosylase activity, whereas a subset of genes was affected by the catalytic activity of TDG. Our results indicate the presence of BER-dependent and BER-independent functions of TDG, which are involved in regulation of cellular DNA damage responses and gene expression patterns.WILEY, Apr. 2017, Genes to cells : devoted to molecular & cellular mechanisms, 22(4) (4), 392 - 405, English, International magazine[Refereed]Scientific journal
- In the mammalian global genome nucleotide excision repair pathway, two damage recognition factors, XPC and UV-DDB, play pivotal roles in the initiation of the repair reaction. However, the molecular mechanisms underlying regulation of the lesion recognition process in the context of chromatin structures remain to be understood. Here, we show evidence that damage recognition factors tend to associate with chromatin regions devoid of certain types of acetylated histones. Treatment of cells with histone deacetylase inhibitors retarded recruitment of XPC to sites of UV-induced DNA damage and the subsequent repair process. Biochemical studies showed novel multifaceted interactions of XPC with histone H3, which were profoundly impaired by deletion of the N-terminal tail of histone H3. In addition, histone H1 also interacted with XPC. Importantly, acetylation of histone H3 markedly attenuated the interaction with XPC in vitro, and local UV irradiation of cells decreased the level of H3K27ac in the damaged areas. Our results suggest that histone deacetylation plays a significant role in the process of DNA damage recognition for nucleotide excision repair and that the localization and functions of XPC can be regulated by acetylated states of histones.WILEY, Mar. 2017, Genes to cells : devoted to molecular & cellular mechanisms, 22(3) (3), 310 - 327, English, International magazine[Refereed]Scientific journal
- Cdt1 is rapidly degraded by CRL4(Cdt2) E3 ubiquitin ligase after UV (UV) irradiation. Previous reports revealed that the nucleotide excision repair (NER) pathway is responsible for the rapid Cdt1-proteolysis. Here, we show that mismatch repair (MMR) proteins are also involved in the degradation of Cdt1 after UV irradiation in the G1 phase. First, compared with the rapid (within approximate to 15min) degradation of Cdt1 in normal fibroblasts, Cdt1 remained stable for approximate to 30min in NER-deficient XP-A cells, but was degraded within approximate to 60min. The delayed degradation was also dependent on PCNA and CRL4(Cdt2). The MMR proteins Msh2 and Msh6 were recruited to the UV-damaged sites of XP-A cells in the G1 phase. Depletion of these factors with small interfering RNAs prevented Cdt1 degradation in XP-A cells. Similar to the findings in XP-A cells, depletion of XPA delayed Cdt1 degradation in normal fibroblasts and U2OS cells, and co-depletion of Msh6 further prevented Cdt1 degradation. Furthermore, depletion of Msh6 alone delayed Cdt1 degradation in both cell types. When Cdt1 degradation was attenuated by high Cdt1 expression, repair synthesis at the damaged sites was inhibited. Our findings demonstrate that UV irradiation induces multiple repair pathways that activate CRL4(Cdt2) to degrade its target proteins in the G1 phase of the cell cycle, leading to efficient repair of DNA damage.TAYLOR & FRANCIS INC, 2017, CELL CYCLE, 16(7) (7), 673 - 684, English[Refereed]Scientific journal
- BACKGROUND: Most patients with xeroderma pigmentosum complementation group D (XP-D) from Western countries suffer from neurological symptoms, whereas Japanese patients display only skin manifestations without neurological symptoms. We have previously suggested that these differences in clinical manifestations in XP-D patients are attributed partly to a predominant mutation in ERCC2, and the allele frequency of S541R is highest in Japan. METHODS: We diagnosed a child with mild case of XP-D by the evaluation of DNA repair activity and whole-genome sequencing, and followed her ten years. RESULTS: Skin cancer, mental retardation, and neurological symptoms were not observed. Her minimal erythema dose was 41 mJ/cm(2) , which was slightly lower than that of healthy Japanese volunteers. The patient's cells showed sixfold hypersensitivity to UV in comparison with normal cells. Post-UV unscheduled DNA synthesis was 20.4%, and post-UV recovery of RNA synthesis was 58% of non-irradiated samples, which was lower than that of normal fibroblasts. Genome sequence analysis indicated that the patient harbored a compound heterozygous mutation of c.1621A>C and c.591_594del, resulting in p.S541R and p.Y197* in ERCC2: then, patient was diagnosed with XP-D. Y197* has not been described before. CONCLUSION: Her mild skin manifestations might be attributed to the mutational site on her genome and daily strict sun protection. c.1621A>C might be a founder mutation of ERCC2 among Japanese XP-D patients, as it was identified most frequently in Japanese XP-D patients and it has not been found elsewhere outside Japan.Jul. 2016, Photodermatology, photoimmunology & photomedicine, 32(4) (4), 174 - 80, English, International magazine[Refereed]Scientific journal
- The xeroderma pigmentosum group C (XPC) protein complex is a key factor that detects DNA damage and initiates nucleotide excision repair (NER) in mammalian cells. Although biochemical and structural studies have elucidated the interaction of XPC with damaged DNA, the mechanism of its regulation in vivo remains to be understood in more details. Here, we show that the XPC protein undergoes modification by small ubiquitin-related modifier (SUMO) proteins and the lack of this modification compromises the repair of UV-induced DNA photolesions. In the absence of SUMOylation, XPC is normally recruited to the sites with photolesions, but then immobilized profoundly by the UV-damaged DNA-binding protein (UV-DDB) complex. Since the absence of UV-DDB alleviates the NER defect caused by impaired SUMOylation of XPC, we propose that this modification is critical for functional interactions of XPC with UV-DDB, which facilitate the efficient damage handover between the two damage recognition factors and subsequent initiation of NER.Jun. 2015, Scientific reports, 5(5) (5), 10984 - 10984, English, International magazine[Refereed]Scientific journal
- In mammalian nucleotide excision repair, the DDB1-DDB2 complex recognizes UV-induced DNA photolesions and facilitates recruitment of the XPC complex. Upon binding to damaged DNA, the Cullin 4 ubiquitin ligase associated with DDB1-DDB2 is activated and ubiquitinates DDB2 and XPC. The structurally disordered N-terminal tail of DDB2 contains seven lysines identified as major sites for ubiquitination that target the protein for proteasomal degradation; however, the precise biological functions of these modifications remained unknown. By exogenous expression of mutant DDB2 proteins in normal human fibroblasts, here we show that the N-terminal tail of DDB2 is involved in regulation of cellular responses to UV. By striking contrast with behaviors of exogenous DDB2, the endogenous DDB2 protein was stabilized even after UV irradiation as a function of the XPC expression level. Furthermore, XPC competitively suppressed ubiquitination of DDB2 in vitro, and this effect was significantly promoted by centrin-2, which augments the DNA damage-recognition activity of XPC. Based on these findings, we propose that in cells exposed to UV, DDB2 is protected by XPC from ubiquitination and degradation in a stochastic manner; thus XPC allows DDB2 to initiate multiple rounds of repair events, thereby contributing to the persistence of cellular DNA repair capacity.Feb. 2015, Nucleic acids research, 43(3) (3), 1700 - 13, English, International magazine[Refereed]Scientific journal
- The Fanconi anemia (FA) pathway, of which the FANCD2 protein is a key component, plays crucial roles in the maintenance of hematopoietic stem cells and suppression of carcinogenesis. However, the function of FANCD2 remains unclear. Here, we report that FANCD2 is a novel and specific substrate of caspase 3. Cleavage of FANCD2 by caspase 3 did not require either the FA core complex or mono-ubiquitylation of FANCD2, and was stimulated by p53. In addition, we identified the cleavage sites and generated cell lines that stably express a caspase-resistant FANCD2 mutant. Our data suggest that FANCD2 is regulated by caspase-mediated degradation during apoptosis induced by DNA damage.ELSEVIER SCIENCE BV, Oct. 2014, FEBS letters, 588(20) (20), 3778 - 85, English, International magazine[Refereed]Scientific journal
- The Fanconi anemia (FA) pathway is critically involved in the maintenance of hematopoietic stem cells and the suppression of carcinogenesis. A key FA protein, FANCD2, is monoubiquitinated and accumulates in chromatin in response to DNA interstrand crosslinks (ICLs), where it coordinates DNA repair through mechanisms that are still poorly understood. Here, we report that CtIP protein directly interacts with FANCD2. A region spanning amino acids 166 to 273 of CtIP and monoubiquitination of FANCD2 are both essential for the FANCD2-CtIP interaction and mitomycin C (MMC)-induced CtIP foci. Remarkably, both FANCD2 and CtIP are critical for MMC-induced RPA2 hyperphosphorylation, an event that accompanies end resection of double-strand breaks. Collectively, our results reveal a role of monoubiquitinated FANCD2 in end resection that depends on its binding to CtIP during ICL repair.CELL PRESS, May 2014, Cell reports, 7(4) (4), 1039 - 47, English, International magazine[Refereed]Scientific journal
- Centrin-2 is an evolutionarily conserved, calmodulin-related protein, which is involved in multiple cellular functions including centrosome regulation and nucleotide excision repair (NER) of DNA. Particularly to exert the latter function, complex formation with the XPC protein, the pivotal NER damage recognition factor, is crucial. Here, we show that the C-terminal half of centrin-2, containing two calcium-binding EF-hand motifs, is necessary and sufficient for both its localization to the centrosome and interaction with XPC. In XPC-deficient cells, nuclear localization of overexpressed centrin-2 largely depends on co-overexpression of XPC, and mutational analyses of the C-terminal domain suggest that XPC and the major binding partner in the centrosome share a common binding surface on the centrin-2 molecule. On the other hand, the N-terminal domain of centrin-2 also contains two EF-hand motifs but shows only low-binding affinity for calcium ions. Although the N-terminal domain is dispensable for enhancement of the DNA damage recognition activity of XPC, it contributes to augmenting rather weak physical interaction between XPC and XPA, another key factor involved in NER. These results suggest that centrin-2 may have evolved to bridge two protein factors, one with high affinity and the other with low affinity, thereby allowing delicate regulation of various biological processes.Lead, Aug. 2013, Nucleic acids research, 41(14) (14), 6917 - 29, English, International magazine[Refereed]Scientific journal
- PURPOSE: Secondary somatic BRCA1/2 mutations may restore BRCA1/2 protein in hereditary ovarian carcinomas. In cell lines, BRCA2 restoration mediates resistance to platinum chemotherapy and poly (ADP-ribose) polymerase (PARP) inhibitors. We assessed primary and recurrent BRCA1/2-mutated ovarian carcinomas to define the frequency of secondary mutations and correlate these changes with clinical outcomes. METHODS: Neoplastic cells were isolated with laser capture microdissection, and DNA was sequenced at the site of the known germline BRCA1/2 mutation. When secondary mutations were found that restored wild-type sequence, haplotyping was performed using single nucleotide polymorphisms in tumor and paired lymphocyte DNA to rule out retention of the wild-type allele. RESULTS: There were 64 primary and 46 recurrent ovarian carcinomas assessed. Thirteen (28.3%) of 46 (95% CI, 17.3% to 42.6%) recurrent carcinomas had a secondary mutation compared with two (3.1%) of 64 (95% CI, 1.0% to 10.7%) primary carcinomas (P = .0003, Fisher's exact test). Twelve (46.2%) of 26 (95% CI, 28.7% to 64.7%) platinum-resistant recurrences had secondary mutations restoring BRCA1/2, compared with one (5.3%) of 19 (95% CI, 1.2% to 24.8%) platinum-sensitive recurrences (P = .003, Fisher's exact test). Six (66.7%) of nine (95% CI, 34.8% to 87.8%) women with prior breast carcinoma had a recurrent carcinoma with a secondary mutation, compared with six (17.1%) of 35 (95% CI, 8.2% to 32.8%) with no history of breast carcinoma (P = .007, Fisher's exact test). CONCLUSION: Secondary somatic mutations that restore BRCA1/2 in carcinomas from women with germline BRCA1/2 mutations predict resistance to platinum chemotherapy and may also predict resistance to PARP inhibitors. These mutations were detectable only in ovarian carcinomas of women whom have had previous chemotherapy, either for ovarian or breast carcinoma.Aug. 2011, Journal of clinical oncology : official journal of the American Society of Clinical Oncology, 29(22) (22), 3008 - 15, English, International magazine[Refereed]
- RAD51 recombinase polymerizes at the site of double-strand breaks (DSBs) where it performs DSB repair. The loss of RAD51 causes extensive chromosomal breaks, leading to apoptosis. The polymerization of RAD51 is regulated by a number of RAD51 mediators, such as BRCA1, BRCA2, RAD52, SFR1, SWS1, and the five RAD51 paralogs, including XRCC3. We here show that brca2-null mutant cells were able to proliferate, indicating that RAD51 can perform DSB repair in the absence of BRCA2. We disrupted the BRCA1, RAD52, SFR1, SWS1, and XRCC3 genes in the brca2-null cells. All the resulting double-mutant cells displayed a phenotype that was very similar to that of the brca2-null cells. We suggest that BRCA2 might thus serve as a platform to recruit various RAD51 mediators at the appropriate position at the DNA-damage site.Jul. 2011, PLoS genetics, 7(7) (7), e1002148, English, International magazine[Refereed]
- Acquired platinum resistance is a serious problem in the treatment of ovarian carcinomas. However, the mechanism of the drug resistance has not been elucidated. Here, we show functional significance of restoration of BRCA2 protein by secondary BRCA2 mutations in acquired drug resistance of BRCA2-mutated ovarian carcinoma. Three ovarian cancer cell lines (PEO1, PEO4, and PEO6) were derived from a BRCA2 mutation [5193C>G (Y1655X)] carrier with ovarian carcinoma with acquired cisplatin resistance and a secondary BRCA2 mutation [5193C>T (Y1655Y)] that canceled the inherited mutation. PEO1 was BRCA2 deficient and sensitive to cisplatin and a poly(ADP-ribose) polymerase inhibitor, AG14361, whereas PEO4 was resistant. PEO4 and PEO6, derived from ascites at the time of relapse with cisplatin resistance, had the secondary mutation and were BRCA2 proficient. In vitro cisplatin/AG14361 selection of PEO1 led to restoration of BRCA2 due to another secondary BRCA2 mutation. BRCA2 depletion sensitized BRCA2-restored PEO1 clones and PEO4 to cisplatin/AG14361. Thus, restoration of BRCA2 due to secondary BRCA2 mutation is involved in acquired drug resistance of BRCA2-mutated ovarian carcinoma.Lead, Aug. 2009, Cancer research, 69(16) (16), 6381 - 6, English, International magazine[Refereed]Scientific journal
- ASCIZ (ATMIN) was recently identified as a novel DNA damage response protein. Here we report that ASCIZ-deficient chicken DT40 B lymphocyte lines displayed markedly increased Ig gene conversion rates, whereas overexpression of human ASCIZ reduced Ig gene conversion below wild-type levels. However, neither the efficiency of double-strand break repair nor hypermutation was affected by ASCIZ levels, indicating that ASCIZ does not directly control homologous recombination or formation of abasic sites. Loss of ASCIZ led to mild sensitivity to the base damaging agent methylmethane sulfonate (MMS), yet remarkably, suppressed the dramatic MMS hypersensitivity of polbeta-deficient cells. These data suggest that ASCIZ may affect the choice between competing base repair pathways in a manner that reduces the amount of substrates available for Ig gene conversion.Jun. 2008, Biochemical and biophysical research communications, 371(2) (2), 225 - 9, English, International magazine[Refereed]
- Although ovarian carcinomas with mutated BRCA1 or BRCA2 are sensitive to platinum compounds, such carcinomas eventually develop platinum resistance. Previously, we showed that acquired resistance to cisplatin in BRCA2-mutated tumors can be mediated by secondary intragenic mutations in BRCA2 that restore the wild-type BRCA2 reading frame. Here, we show that secondary mutations of BRCA1 also occur in BRCA1-mutated ovarian cancer with platinum resistance. We evaluated nine recurrent BRCA1-mutated ovarian cancers previously treated with platinum compounds, including five with acquired platinum resistance, one with primary platinum resistance, and three with platinum sensitivity. Four of the six recurrent platinum-resistant tumors had developed secondary genetic changes in BRCA1 that restored the reading frame of the BRCA1 protein, whereas none of the three platinum-sensitive recurrent tumors developed BRCA1 sequence alterations. We immunohistochemically confirmed restored expression of BRCA1 protein in two cases with secondary mutations. Intriguingly, the case with primary platinum resistance showed back mutation of BRCA1 in the primary tumor and showed another secondary mutation in the recurrent tumor. Our results suggest that secondary mutations in BRCA1 can mediate resistance to platinum in BRCA1-mutated ovarian tumors.Lead, Apr. 2008, Cancer research, 68(8) (8), 2581 - 6, English, International magazine[Refereed]
- Ovarian carcinomas with mutations in the tumour suppressor BRCA2 are particularly sensitive to platinum compounds. However, such carcinomas ultimately develop cisplatin resistance. The mechanism of that resistance is largely unknown. Here we show that acquired resistance to cisplatin can be mediated by secondary intragenic mutations in BRCA2 that restore the wild-type BRCA2 reading frame. First, in a cisplatin-resistant BRCA2-mutated breast-cancer cell line, HCC1428, a secondary genetic change in BRCA2 rescued BRCA2 function. Second, cisplatin selection of a BRCA2-mutated pancreatic cancer cell line, Capan-1 (refs 3, 4), led to five different secondary mutations that restored the wild-type BRCA2 reading frame. All clones with secondary mutations were resistant both to cisplatin and to a poly(ADP-ribose) polymerase (PARP) inhibitor (AG14361). Finally, we evaluated recurrent cancers from patients whose primary BRCA2-mutated ovarian carcinomas were treated with cisplatin. The recurrent tumour that acquired cisplatin resistance had undergone reversion of its BRCA2 mutation. Our results suggest that secondary mutations that restore the wild-type BRCA2 reading frame may be a major clinical mediator of acquired resistance to platinum-based chemotherapy.Lead, Feb. 2008, Nature, 451(7182) (7182), 1116 - 20, English, International magazine[Refereed]
- Genetic dissection of vertebrate 53BP1: a major role in non-homologous end joining of DNA double strand breaks.53BP1 (p53 binding protein) is a BRCT domain-containing protein that is rapidly recruited to DNA double strand breaks (DSBs). To investigate the role of 53BP1 in the DNA damage response, we generated 53BP1(-/-) cells from the chicken DT40 cell line. As in mammalian cells, mutation of 53BP1 increased cellular sensitivity to ionizing radiation. Although depletion of 53BP1 resulted in checkpoint defects in mammalian cells, DT40 53BP1(-/-) cells had normal intra S phase and G2/M checkpoints. G1 specific radiosensitivity and a higher sensitivity to topoisomerase II suggested defective non-homologous end joining (NHEJ) defects in DT40 53BP1(-/-) cells. Genetic analyses confirm this suggestion as we have demonstrated an epistatic relationship between 53BP1 and the NHEJ genes, Ku70 and Artemis, but not with Rad54, a gene essential for repair of DSBs by homologous recombination. We conclude that the major role of 53BP1 in supporting survival of DT40 cells that have suffered DNA DSBs is in facilitating repair by NHEJ.Jun. 2006, DNA repair, 5(6) (6), 741 - 9, English, International magazine[Refereed]
- Lessons from the genome sequence of Neurospora crassa: tracing the path from genomic blueprint to multicellular organism.We present an analysis of over 1,100 of the approximately 10,000 predicted proteins encoded by the genome sequence of the filamentous fungus Neurospora crassa. Seven major areas of Neurospora genomics and biology are covered. First, the basic features of the genome, including the automated assembly, gene calls, and global gene analyses are summarized. The second section covers components of the centromere and kinetochore complexes, chromatin assembly and modification, and transcription and translation initiation factors. The third area discusses genome defense mechanisms, including repeat induced point mutation, quelling and meiotic silencing, and DNA repair and recombination. In the fourth section, topics relevant to metabolism and transport include extracellular digestion; membrane transporters; aspects of carbon, sulfur, nitrogen, and lipid metabolism; the mitochondrion and energy metabolism; the proteasome; and protein glycosylation, secretion, and endocytosis. Environmental sensing is the focus of the fifth section with a treatment of two-component systems; GTP-binding proteins; mitogen-activated protein, p21-activated, and germinal center kinases; calcium signaling; protein phosphatases; photobiology; circadian rhythms; and heat shock and stress responses. The sixth area of analysis is growth and development; it encompasses cell wall synthesis, proteins important for hyphal polarity, cytoskeletal components, the cyclin/cyclin-dependent kinase machinery, macroconidiation, meiosis, and the sexual cycle. The seventh section covers topics relevant to animal and plant pathogenesis and human disease. The results demonstrate that a large proportion of Neurospora genes do not have homologues in the yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe. The group of unshared genes includes potential new targets for antifungals as well as loci implicated in human and plant physiology and disease.Mar. 2004, Microbiology and molecular biology reviews : MMBR, 68(1) (1), 1 - 108, English, International magazine[Refereed]
- Isolation and genetic characterization of the Neurospora crassa REV1 and REV7 homologs: evidence for involvement in damage-induced mutagenesis.In a previous paper, we reported that the Neurospora crassa upr-1 gene is a homolog of the yeast gene REV3, which encodes the catalytic subunit of DNA polymerase zeta (polzeta). Characterization of the upr-1 mutant indicated that the UPR1 protein plays a role in DNA repair and mutagenesis. To help understand the mechanisms of mutagenic DNA repair in the N. crassa more extensively, we identified N. crassa homologs of yeast REV1 and REV7 and obtained mutants ncrev1 or ncrev7, which had similar phenotypes to the upr-1 mutant. Mutant carrying ncrev7 was more sensitive to UV and 4NQO, and slightly sensitive to MMS than the wild-type. The sensitivity to UV and MMS of the ncrev1 mutant was moderately higher than that of the wild-type, but the sensitivity to 4NQO of the mutant was similar to that of the wild-type. In reversion assay using testers with base substitution or frameshift mutation at the ad-3A locus, each of ncrev1 and ncrev7 mutants showed lower induced-mutability than the wild-type. Expression of ncrev1 and ncrev7 was found to be UV-inducible like the case of upr-1. Genetic analyses showed that the ncrev7 was identical to mus-26, which belongs to the upr-1 epistasis group, and that the ncrev1 was a newly identified DNA repair gene and designated as mus-42. Interestingly, all three mutants have a normal CPD photolyase gene, however, they showed a partial photoreactivation defect (PPD) phenotype, not completely defective but inefficient in photoreactivation. These results suggest that N. crassa REV homolog genes function in DNA repair and UV mutagenesis through the bypass of (6-4) photoproducts.Lead, Mar. 2003, DNA repair, 2(3) (3), 337 - 46, English, International magazine[Refereed]
- The upr-1 gene encodes a catalytic subunit of the DNA polymerase zeta which is involved in damage-induced mutagenesis in Neurospora crassa.The upr-1 mutant was one of the first mutagen-sensitive mutants to be isolated in Neurospora crassa. However, the function of the upr-1 gene has not yet been elucidated, although some genetic and biochemical data have been accumulated. In order to clone the upr-1 gene, we performed a chromosome walk from the mat locus, the closest genetic marker to upr-1 for which a molecular probe was available, towards the centromere, and a chromosomal contig of about 300-400 kb was constructed. Some of these clones complemented the temperature sensitivity of the un-16 mutation, which is located between mat and upr-1. The un-16 gene was sequenced, and localized in the MIPS Neurospora crassa genome database. We then searched the regions flanking un-16 for homologs of known DNA repair genes, and found a gene homologous to the REV3 gene of budding yeast. The phenotype of the upr-1 mutant is similar to that of the yeast rev3 mutant. An ncrev3 mutant carrying mutations in the N. crassa REV3 homolog was constructed using the RIP (repeat-induced point mutation) process. The spectrum of mutagen sensitivity of the ncrev3 mutant was similar to that of the upr-1 mutant. Complementation tests between the upr-1 and ncrev3 mutations indicated that the upr-1 gene is in fact identical to the ncrev3 gene. To clarify the role of the upr-1 gene in DNA repair, the frequency of MMS and 4NQO-induced mutations was assayed using the ad-8 reversion test. The upr-1 mutant was about 10 times less sensitive to both chemicals than the wild type. The expression level of the upr-1 gene is increased on exposure to UV irradiation in the uvs-2 and mus-8 mutants, which belong to postreplication repair group, as well as in the wild type. All these results suggest that the product of the upr-1 gene functions in damage-induced mutagenesis and DNA translesion synthesis in N. crassa.Lead, May 2002, Molecular genetics and genomics : MGG, 267(3) (3), 401 - 8, English, International magazine[Refereed]
- The intrinsic instability of genomic DNA renders it susceptible to damage by spontaneously produced by-products such as reactive oxygen species and aldehyde metabolites or environmental genotoxins such as radiation and chemicals. Unrepaired DNA damage interferes with essential DNA transactions, such as replication and transcription, and eventually gives rise to the alteration of genetic information. Because genomic instability can cause cell death or carcinogenesis, DNA damage must be recognized and repaired as quickly as possible. Several mechanisms of DNA repair that function according to the type of damage underlie a highly sensitive system capable of detecting a few sites of damage among the large amount of normal DNA in the genome. Nucleotide excision repair (NER) is a major DNA repair pathway that can eliminate a wide spectrum of damage. In mammals, NER is executed by two subpathways: global genome repair (GGR) and transcription-coupled repair. Both subpathways share common core NER factors but possess unique systems for recognizing DNA damage. Transcription-coupled repair is initiated by the stalling of RNA polymerase II and is responsible for the accelerated repair of DNA damage in the transcribed strand of active genes. By contrast, GGR is initiated by xeroderma pigmentosum group C (XPC) and/or the UV-damaged DNA-binding protein (UV-DDB) complex, followed by the sequential actions of other NER-associated factors. This chapter reviews the molecular mechanisms underlying the recognition and repair of DNA damage by mammalian GGR.Springer Japan, 01 Jan. 2016, DNA Replication, Recombination, and Repair: Molecular Mechanisms and Pathology, 155 - 174, English[Refereed][Invited]Introduction other
- GENETICS SOC JAPAN, Dec. 2015, GENES & GENETIC SYSTEMS, 90(6) (6), 397 - 397, EnglishStudies on the de-ubiquitination mechanism for the xeroderma pigmentosum group C protein in UV damage responseSummary international conference
- ELSEVIER SCIENCE BV, Apr. 2015, DNA REPAIR, 28, 144 - 144, EnglishPost-translational modifications coordinating recognition and repair of UV-induced DNA damageSummary international conference
- GENETICS SOC JAPAN, Dec. 2014, GENES & GENETIC SYSTEMS, 89(6) (6), 312 - 312, EnglishStudies on the de-ubiquitylation mechanism of the xeroderma pigmentosum group C proteinSummary international conference
- 31 Aug. 2014, 日本遺伝学会大会プログラム・予稿集, 86th, 99, Japanese紫外線損傷修復におけるXPCタンパク質の脱ユビキチン化機構の解析
- GENETICS SOC JAPAN, Dec. 2013, GENES & GENETIC SYSTEMS, 88(6) (6), 361 - 361, EnglishA novel function of FANCD2 protein in apoptosis signalingSummary international conference
- GENETICS SOC JAPAN, Dec. 2012, GENES & GENETIC SYSTEMS, 87(6) (6), 386 - 386, EnglishStudies on the de-ubiquitylation mechanism of the xeroderma pigmentosum group C proteinSummary international conference
- 31 Aug. 2012, 日本遺伝学会大会プログラム・予稿集, 84th, 72, Japanese紫外線損傷修復におけるXPCタンパク質の脱ユビキチン化機構の解析
- 2012, 日本分子生物学会年会プログラム・要旨集(Web), 35thゲノム安定維持に関わるcentrin-2の新たな機能
- GENETICS SOC JAPAN, Feb. 2010, GENES & GENETIC SYSTEMS, 85(1) (1), 86 - 86, EnglishGenotoxic stress targets Fanconi anemia group D2 protein for fragmentation by the caspase-mediated pathwaySummary international conference
- ACADEMIC PRESS INC ELSEVIER SCIENCE, Dec. 2008, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 377(1) (1), 326 - 326, EnglishOthers
■ Lectures, oral presentations, etc.
- 日本環境変異原ゲノム学会第53回大会, Dec. 2024, Japanese脂肪族アルデヒドの代謝異常がゲノム安定性に及ぼす影響[Invited]Invited oral presentation
- 第47回日本分子生物学会年会, Nov. 2024, Japaneseヌクレオチド除去修復のDNA損傷認識制御におけるヒストン修飾の役割Poster presentation
- 第47回日本分子生物学会年会, Nov. 2024, Japaneseアルデヒド脱水素酵素ALDH3A2の欠損がゲノム安定性に及ぼす影響Poster presentation
- 第47回日本分子生物学会年会, Nov. 2024, Japaneseヌクレオチド除去修復のDNA損傷認識を制御するクロマチン構造変換機構Poster presentation
- The12th 3R+3C International Symposium, Nov. 2024, EnglishThe involvement of chromatin remodeling factor SMACRAD1 in response to DNA double strand breaksPoster presentation
- The12th 3R+3C International Symposium, Nov. 2024, EnglishImpact of histone modifications on damage recognition process of global genome nucleotide excision repairPoster presentation
- 日本放射線影響学会第67回大会, Sep. 2024, Japaneseヌクレオチド除去修復の損傷認識制御におけるヒストン修飾の役割Oral presentation
- 第41回染色体ワークショップ・第22回核ダイナミクス研究会, Jan. 2024, Japanese損傷クロマチン基質を用いたヌクレオチド除去修復制御機構の生化学的解析Poster presentation
- 第41回染色体ワークショップ・第22回核ダイナミクス研究会, Jan. 2024, Japaneseヌクレオチド除去修復の損傷監視制御におけるヒストン修飾の役割Oral presentation
- 第46回日本分子生物学会年会, Dec. 2023, Japaneseヌクレオチド除去修復のDNA損傷認識制御におけるヒストンH3K9メチル化修飾の役割Poster presentation
- 第46回日本分子生物学会年会, Dec. 2023, Japanese紫外線誘発DNA損傷に対する細胞応答におけるクロマチンリモデリング因⼦SMARCAD1の関与Poster presentation
- 第46回日本分子生物学会年会, Dec. 2023, JapaneseDNAポリメラーゼ‧イータの発現調節における脱ユビキチン化酵素USP11の関与Poster presentation
- 第46回日本分子生物学会年会, Dec. 2023, Japaneseゲノム全体を対象としたヌクレオチド除去修復の損傷認識を制御するクロマチン動態Oral presentation
- 第46回日本分子生物学会年会, Dec. 2023, Japaneseヒストン翻訳後修飾を介したXPCタンパク質の核内局在制御Poster presentation
- 第46回日本分子生物学会年会, Dec. 2023, Japaneseヌクレオチド除去修復のDNA損傷認識を制御するクロマチン構造変換機構Poster presentation
- 日本環境変異原ゲノム学会第52回大会, Nov. 2023, Japanese脂肪族アルデヒド脱水素酵素の欠損により生じる細胞毒性の解析Poster presentation
- 日本環境変異原ゲノム学会第52回大会, Nov. 2023, Japanese脂肪族アルデヒド脱水素酵素のゲノム安定性維持における影響Oral presentation
- 第45回日本分子生物学会年会, Nov. 2022, Japanese脂質代謝制御におけるファンコニ貧血タンパク質の機能解析Poster presentation
- 第45回日本分子生物学会年会, Nov. 2022, Japaneseヌクレオチド除去修復におけるDNA損傷認識を制御するクロマチン構造変換因子複合体Poster presentation
- 第45回日本分子生物学会年会(幕張)ワークショップ, Nov. 2022, Japanese脂質代謝制御におけるファンコニ貧血タンパク質の機能解析Oral presentation
- 日本放射線影響学会第65回大会, Sep. 2022, Japaneseヌクレオチド除去修復における紫外線誘発DNA損傷の効率的な認識に寄与するヒストン修飾Oral presentation
- 第39回染色体ワークショップ・第20回核ダイナミクス研究会, Dec. 2021, Japanese色素性乾皮症C群タンパク質によるDNA損傷認識を制御するクロマチン動態Poster presentation
- 第39回染色体ワークショップ・第20回核ダイナミクス研究会, Dec. 2021, Japaneseヒストン脱アセチル化はヌクレオチド除去修復におけるDNA損傷認識を制御するPoster presentation
- 第44回日本分子生物学会年会, Dec. 2021, Japaneseヒストン脱アセチル化はヌクレオチド除去修復におけるDNA損傷認識を制御するPoster presentation
- 第44回日本分子生物学会年会, Dec. 2021, Japanese脱ユビキチン化酵素による損傷乗り越え合成の制御機構の解析Poster presentation
- 第44回日本分子生物学会年会, Dec. 2021, Japaneseファンコニ貧血タンパク質の脂質代謝における機能解析Poster presentation
- 第44回日本分子生物学会年会, Dec. 2021, Japanese色素性乾皮症C群タンパク質によるDNA損傷認識を制御するクロマチン動態Poster presentation
- 第94回日本生化学会大会, Nov. 2021, Japaneseヌクレオチド除去修復におけるDNA損傷認識を制御するクロマチンダイナミクスOral presentation
- 日本環境変異原学会第49回大会, Nov. 2020, Japanese脂質代謝におけるファンコニ貧血タンパク質の機能解析Oral presentation
- 第42回日本分子生物学会年会, JapaneseRNAを介したヌクレオチド除去修復制御機構の解析Poster presentation
- 第42回日本分子生物学会年会, Japanese脂質代謝に応答したファンコニ貧血タンパク質のダイナミクスPoster presentation
- 第42回日本分子生物学会年会, Japaneseファンコニ貧血タンパク質FANCD2と脂質代謝関連因子の機能的連関の解 析Poster presentation
- 第42回日本分子生物学会年会, JapaneseDNAポリメラーゼ・イータと脱ユビキチン化酵素の相互作用の解析Poster presentation
- 第42回日本分子生物学会年会, JapaneseTLSポリメラーゼの損傷部位への導入過程を生細胞イメージングにより解 析する試みPoster presentation
- 第42回日本分子生物学会年会, JapaneseXPCタンパク質によるDNA損傷認識の制御とヒストン修飾の役割Poster presentation
- 第42回日本分子生物学会年会, Japaneseヌクレオチド除去修復の損傷認識を制御するクロマチン構造変換因子の探 索Poster presentation
- 第3回オルガネラ・ゾーン研究会, Japanese核内-細胞質における脂肪滴のダイナミクスOral presentation
- 6th Asian Congress on Environmental Mutagens (ACEM) and 48th Annual Meeting of the Japanese Environmental Mutagen Society (JEMS), EnglishChromatin dynamics regulating DNA lesion recognition in nucleotide excision repairOral presentation
- サイエンスフロンティア研究発表会, Oct. 2019, JapaneseTLSポリメラーゼの生細胞イメージングとその定量解析への取り組みPoster presentation
- 2019 Fanconi anemia research fund 31st scientific symposium, EnglishDynamics of FANCD2 in response to lipid metabolism.Poster presentation
- 日本環境変異原学会第47回大会, Nov. 2018, Japanese, 京都, Domestic conference脂肪族アルデヒド代謝におけるファンコニ貧血タンパク質の機能解析Oral presentation
- 第41回日本分子生物学会年会, Nov. 2018, Japanese, 横浜, Domestic conferenceファンコニ貧血タンパク質FANCD2と脂質代謝関連因子の相互作用解析Poster presentation
- 第41回日本分子生物学会年会, Nov. 2018, Japanese, 横浜, Domestic conferenceXPCタンパク質によるDNA損傷認識の制御におけるヒストン修飾の役割Poster presentation
- 第91回生化学会大会, Sep. 2018, Japanese, 京都, Domestic conferenceクロマチン構造を介したヌクレオチド除去修復の高次制御機構Oral presentation
- 日本遺伝学会第90回大会, Sep. 2018, Japanese, 奈良, Domestic conferenceFunctional impact of ubiquitin-proteasome system on UV-induced DNA damage response and repairOral presentation
- 日本環境変異原学会公開シンポジウム, Jun. 2018, Japanese, 東京, Domestic conferenceメタボリックDNA損傷を抑制する新規メカニズムの可能性について[Invited]Nominated symposium
- 2017年度生命科学系学会合同年次大会, Dec. 2017, Japanese, 神戸国際会議場, Domestic conferenceヌクレオチド除去修復の開始を制御するクロマチン構造の役割Oral presentation
- 日本環境変異原学会第46回大会, Nov. 2017, Japanese, 一橋大学 一橋講堂, Domestic conference脂質アルデヒド代謝におけるファンコニ貧血タンパク質の機能解析Poster presentation
- 第24回DNA複製・組換え・修復ワークショップ, Nov. 2017, Japanese, 長良川国際会議場, Domestic conferenceユビキチン-プロテアソーム系による紫外線誘発DNA損傷応答制御Oral presentation
- 第24回DNA複製・組換え・修復ワークショップ, Nov. 2017, Japanese, 長良川国際会議場, Domestic conferenceヌクレオチド除去修復の開始を制御するクロマチン構造の役割Oral presentation
- 2017 FA Scientific Symposium, Sep. 2017, English, Grand Hyatt Atlanta in Buckhead/Atlanta USA, International conferenceFatty aldehyde dehydrogenase as a novel binding partner of FANCD2[Invited]Invited oral presentation
- 第39回日本分子生物学会年会(MBSJ2016), Nov. 2016, Japanese, 日本分子生物学会, 横浜, Domestic conferenceタンパク質分解系による紫外線誘発DNA損傷応答制御Poster presentation
- The 10th 3R Symposium, Nov. 2016, English, The 10th 3R Symposium Organizing Committee, Matsue, Shimane, Japan, International conferenceFunctional impact of ubiquitin-proteasome system on UV-induced DNA damage response and repairPoster presentation
- 第39回日本分子生物学会年会(MBSJ2016), Nov. 2016, Japanese, 日本分子生物学会, 横浜, Domestic conferenceFANCD2新規相互作用因子の探索と機能解析Oral presentation
- 第39回日本分子生物学会年会(MBSJ2016), Nov. 2016, Japanese, 日本分子生物学会, 横浜, Domestic conferenceDNA損傷認識を制御するクロマチン構造動態Poster presentation
- 第89回日本生化学会大会, Sep. 2016, Japanese, 日本分子生物学会, 仙台, Domestic conferenceヌクレオチド除去修復のDNA損傷認識とその制御の分子基盤Oral presentation
- Conference on Responses to DNA Damage: from Molecule to Disease, Apr. 2016, English, Egmond aan Zee, The Netherlands, International conferenceDynamics of chromatin structure regulating nucleotide excision repairPoster presentation
- 第38回日本分子生物学会年会・第88回日本生化学会大会合同大会(BMB2015), Dec. 2015, Japanese, 日本分子生物学会, 神戸, Domestic conferenceヌクレオチド除去修復を制御するクロマチン構造動態の解析Poster presentation
- 第38回日本分子生物学会年会・第88回日本生化学会大会合同大会(BMB2015), Dec. 2015, Japanese, 日本分子生物学会, 神戸, Domestic conferenceタンパク質分解系による紫外線損傷応答制御Oral presentation
- 第38回日本分子生物学会年会・第88回日本生化学会大会合同大会(BMB2015), Dec. 2015, Japanese, 日本分子生物学会, 神戸, Domestic conferenceゲノム損傷応答におけるp53とDDB2の機能連関Poster presentation
- 第23回DNA複製・組換え・修復ワークショップ, Oct. 2015, Japanese, DNA複製・組換え・修復ワークショップ研究会, 焼津, Domestic conferenceユビキチンープロテアソーム系による紫外線誘発DNA損傷応答制御Oral presentation
- 日本遺伝学会第87回大会, Sep. 2015, Japanese, 日本遺伝学会, 仙台, Domestic conference紫外線損傷修復におけるXPCタンパク質の脱ユビキチン化制御機構の解析Oral presentation
- 15th International Congress of Radiation Research, May 2015, English, ICRR, 京都, International conferenceMolecular mechanism of DNA damage recognition in mammalian nucleotide excision repair.Oral presentation
- 日本薬学会第135年会, Mar. 2015, Japanese, 神戸学院大学, Domestic conferenceヌクレオチド除去修復の制御に関わるクロマチン構造動態Oral presentation
- 第37回日本分子生物学会年会, Nov. 2014, Japanese, パシフィコ横浜, Domestic conference翻訳後修飾を介した色素性乾皮症遺伝子産物の機能制御Oral presentation
- 第37回日本分子生物学会年会, Nov. 2014, Japanese, パシフィコ横浜, Domestic conferenceゲノム損傷応答におけるGadd45αの機能解析Poster presentation
- The 9th 3R Symposium Together with National Instituite of Genetics 2014 International Symposium, Nov. 2014, English, 御殿場高原ホテル, International conferenceStudies on the de-ubiquitination mechanism of the xeroderma pigmentosum group C proteinPoster presentation
- 第37回日本分子生物学会年会, Nov. 2014, Japanese, パシフィコ横浜, Domestic conferenceDNA損傷応答におけるDDB2の翻訳後修飾の機能解析Poster presentation
- 第37回日本分子生物学会年会, Nov. 2014, Japanese, パシフィコ横浜, Domestic conferenceDNA修復・損傷応答におけるクロマチン構造ダイナミクスの解析Poster presentation
- 日本遺伝学会第86回大会, Sep. 2014, Japanese, 長浜バイオ大学, Domestic conference紫外線損傷修復におけるXPCタンパク質の脱ユビキチン化機構の解析Poster presentation
- International Symposium on Xeroderma Pigmentosum and Related Diseases, Mar. 2014, English, Kobe, Japan, International conferenceRoles for post-translational protein modifications in regulation of DNA damage recognition for mammalian nucleotide excision repairOral presentation
- International Symposium on Xeroderma Pigmentosum and Related Diseases, Mar. 2014, English, Kobe, Japan, International conferenceMolecular analysis of DNA repair defects in cells from Japanese patients with xeroderma pigmentosum Group DPoster presentation
- International Symposium on Xeroderma Pigmentosum and related diseases, Mar. 2014, English, Kobe, International conferenceA child case of xeroderma pigmentosum group D.Poster presentation
- 第36回日本分子生物学会年会, Dec. 2013, Japanese, 神戸, Domestic conferenceヌクレオチド除去修復の損傷認識に関わるクロマチン構造制御Poster presentation
- 第36回日本分子生物学会年会, Dec. 2013, Japanese, 神戸, Domestic conferenceFANCD2タンパク質はアポトーシスを抑制的に制御するOral presentation
- 厚生労働省科学研究費「神経皮膚症候群に関する調査研究班」平成25年度総会, Dec. 2013, Japanese, 神経皮膚症候群に関する調査研究班, 東京, Domestic conferenceDNA修復異常を伴う光線過敏症患者の分子細胞生物学的解析Others
- 第31回染色体ワークショップ・第12回核ダイナミクス研究会, Nov. 2013, Japanese, 箱根, Domestic conferenceファンコニ貧血症タンパク質FANCD2によるアポトーシス制御機構Oral presentation
- 第22回DNA複製・組換え・修復ワークショップ, Nov. 2013, Japanese, 仙台, Domestic conferenceファンコニ貧血症タンパク質FANCD2によるアポトーシス制御機構Poster presentation
- International Symposium on Transcription and Metabolism, Nov. 2013, English, Awaji, Japan, International conferenceFunctional interactions of DNA damage repair with transcriptional and epigenetic regulationOral presentation
- International Symposium on Transcription and Metabolism, Nov. 2013, English, Awaji, Japan, International conferenceChromatin structure regulating DNA damage recognition in nucleotide excision repairOral presentation
- 日本放射線影響学会第56回大会, Oct. 2013, Japanese, 青森, Domestic conference紫外線誘発DNA損傷の修復機構におけるSUMO化修飾の役割Oral presentation
- 25th Annual Fanconi Anemia Research Fund Scientific Symposium, Oct. 2013, English, Houston, Texas, International conferenceFANCD2 in chromatin anchors CtIP and regulates DNA end resection during crosslink repair.Oral presentation
- 第22回日本Cell Death学会学術集会, Jul. 2013, Japanese, 京都, Domestic conferenceFANCD2はDNA修復に関わる機能とは独立してTNFα/TNFR1を介したアポトーシス機構を負に制御しているOral presentation
- 日本遺伝学会第85回大会, 2013, Japanese, 横浜, Domestic conferenceFANCD2遺伝子産物はDNA修復とは独立したアポトーシス抑制機能を有するOral presentation
- 第30回染色体ワークショップ, Dec. 2012, Japanese, 淡路, Domestic conferenceFANCD2 タンパク質はアポトーシスを抑制的に制御するPublic symposium
- 第35回日本分子生物学会年会, Dec. 2012, Japanese, 日本分子生物学会, 福岡, Domestic conferenceA novel function of FANCD2 protein in apoptosis signaling (2ST2-026)Poster presentation
- 第35回日本分子生物学会, Dec. 2012, Japanese, 福岡, Domestic conferenceA novel function of centrin-2 involved in maintenance of genomic stability.Oral presentation
- The 8th 3R Symposium (International Symposium on DNA Replication, Recombination and Repair), Nov. 2012, English, Awaji, International conferenceGenotoxic stress induces caspase-mediated cleavage of the FANCD2 protein.Public symposium
- The 8th 3R Symposium (International Symposium on DNA Replication, Recombination and Repair), Nov. 2012, English, Awaji, International conferenceDNA repair synthesis defect in xeroderma pigmentosum group D cells.Public symposium
- 日本遺伝学会第84回大会, Sep. 2012, Japanese, 福岡, Domestic conference紫外線損傷修復におけるXPCタンパク質の脱ユビキチン化機構の解析Oral presentation
- 第29回染色体ワークショップ, Jan. 2012, Japanese, 仙台, Domestic conferenceDNA損傷ストレスに伴うFANCD2タンパク質のカスパーゼ依存的切断Oral presentation
- 第34回日本分子生物学会年会, Dec. 2011, Japanese, 日本分子生物学会, 横浜, Domestic conferenceGenotoxic stress induces caspase-mediated cleavage of the FANCD2 proteinOral presentation
- 第33回日本分子生物学会年会・第83回日本生化学会大会合同大会, Dec. 2010, Japanese, 日本分子生物学会, 神戸ポートアイランド, Domestic conferenceDNA損傷ストレスに伴うFANCD2タンパク質のカスパーゼ依存的切断Oral presentation
- The 7th 3R Symposium (International Symposium on DNA Replication, Recombination and Repair), Oct. 2010, English, 第7回3Rシンポジウム実行委員会, 富山国際会議場, Domestic conferenceRoles for centrin-2 in DNA damage recognition for global genome nucleotide excision repairOral presentation
- The 7th 3R Symposium (International Symposium on DNA Replication, Recombination and Repair), Oct. 2010, English, 第7回3Rシンポジウム実行委員会, 富山, Domestic conferenceGenotoxic stress induces caspase-mediated cleavage of the FANCD2 proteinPoster presentation
- 第32回日本分子生物学会年会, Dec. 2009, Japanese, 日本分子生物学会, パシフィコ横浜, Domestic conferenceGenotoxic stress targets Fanconi anemia group D2 protein for fragmentation by the caspase-mediated pathwayPoster presentation
- 日本遺伝学会第81回大会, Sep. 2009, Japanese, 日本遺伝学会, 松本, Domestic conferenceDNA損傷に伴うFANCD2(FA-D2)タンパク質のcaspase依存的切断Oral presentation
- BMB2008 第31回日本分子生物学会年会・第81回日本生化学会大会, Dec. 2008, Japanese, Kobe, Domestic conferenceBRCA2変異卵巣癌細胞における第二のBRCA2変異は機能的BRCA2を復活させ、抗癌剤に対する耐性の原因となるOral presentation
- 国立遺伝学研究所研究集会「ユビキチン・SUMOによるDNA複製およびDNA修復系の制御」, Oct. 2008, Japanese, 三島, Domestic conferenceBRCA2変異卵巣癌細胞における第二のBRCA2変異は機能的BRCA2を復活させ、抗癌剤に対する耐性の原因となるOral presentation
- 日本学術振興会, 科学研究費助成事業, 基盤研究(C), 神戸大学, 01 Apr. 2020 - 31 Mar. 2023ファンコニ貧血における脂肪族アルデヒド代謝の影響申請者はファンコニ貧血の責任遺伝子産物(FAタンパク質)の1つであるFANCD2タンパク質と脂質代謝に関与する酵素の1つが相互作用することを質量分析によって見出した。当該年度においては、免疫沈降等により、それらの相互作用が外部からのDNA損傷ストレスに依存せず比較的安定的であることが明らかとなった。また、前年度に樹立した脂質代謝関連遺伝子のノックアウト細胞株を用いて、その影響について解析を行なった。具体的には、1)脂質代謝因子のノックアウトによって細胞増殖に遅延が見られたが、2)DNA損傷に応答したFANCD2のモノユビキチン化には異常は見られなかった。しかし、3)ヒストンバリアントH2AXのリン酸化(DNA損傷マーカーとして知られる)の顕著な減弱が見出された。本研究課題で着目している脂質代謝関連因子はDNA損傷応答・修復への関与は全く報告されておらず、特に3)の結果は脂質代謝制御とDNA損傷のシグナル伝達の新たな機能的連関を示唆する成果と言える。今後より詳細にこれらのシグナル伝達経路を解析するため、樹立したノックアウト細胞に野生型、または変異導入によって酵素活性を欠失した変異型を安定発現した細胞をすでに樹立済みである。 また、申請者はFANCD2遺伝子のノックアウトによって脂質代謝制御に異常が見られることを前年度に明らかにしたが、同様の脂質代謝異常が他のFAタンパク質の発現抑制によっても引き起こされることが新たに判明した。これらの結果はFANCD2のみならず、他のFAタンパク質においても脂質代謝制御に関与する可能性を示唆しており、ファンコニ貧血患者において見られる脂質代謝異常の病態との関連性が期待される。
- 学術研究助成基金助成金/基盤研究(C), Apr. 2017 - Mar. 2020, Principal investigatorCompetitive research funding
- Japan Society for the Promotion of Science, Grants-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area), Kobe University, 01 Apr. 2011 - 31 Mar. 2016Cross-regulation of the maintenance and mutagenesis of genomic sequence and epigenetic informationIn this study, it is suggested that formation of heterochromatin-like structures is involved in regulation of intracellular localization of DNA damage recognition factors for nucleotide excision repair. We also elucidate novel roles of various post-translational modifications (ubiquitination, SUMOylation, acetylation, etc.) in functional regulation of the DDB2 protein, which is involved in crosstalks between DNA repair and transcription, thereby regulating cellular DNA damage responses. Furthermore, the molecular mechanism is uncovered for regulating stability of thymine DNA glycosylase (TDG), which is a key factor involved in both base excision repair suppressing spontaneous mutagenesis as well as active DNA demethylation. TDG is also shown to interact functionally with the nucleotide excision repair pathway by affecting functions of the xeroderma pigmentosum group C (XPC) protein.
- 学術研究助成基金助成金/若手研究(B), Apr. 2014 - Mar. 2016, Principal investigatorCompetitive research funding
- Japan Society for the Promotion of Science, Grants-in-Aid for Scientific Research, Grant-in-Aid for Young Scientists (A), Kobe University, 2010 - 2012, Principal investigatorFANCD2is one ofthe responsiblegenes for a rare genetic disorder, Fanconi anemia syndrome. Many researchers reported that FANCD2 protein is a key factor for DNA interstrand crosslink repair. In the pilot study, I found a novel phenomenon that the FANCD2 protein was cleaved into atleast four smaller fragments when cells were treated with relatively high doses of genotoxic agents. In vitro and in vivo analyses showed that the DNA damage-induced cleavage of FANCD2 was dependent on caspase-3. All the cleavage sites were identified and the mutant FANCD2 protein lacking those cleavage sites was generated. When the non-cleavable mutant FANCD2 protein was stably expressed in a FANCD2-deficient cell line, the cells showed resistance to genotoxic agents compared with the cell line expressed wild-type FANCD2 protein. In the absence of exogenous genotoxic stress, however, only cell line expressed wild-type FANCD2 showed significant resistance to apoptosis induction by caspase-8 activation. All these results implied the possibility that FANCD2 contributes to regulate apoptosis induction negatively independent of DNA repair response.Competitive research funding